CHO Cell Line Genetic Stability (MCB, WCB, EOP) Testing
Over the past several decades, numerous therapeutic recombinant proteins (e.g., monoclonal antibodies, bi-specific monoclonal antibodies, growth factors, cytokines, hormones, enzymes, and vaccines) have been approved by regulatory authorities, and many more are currently undergoing clinical development. Chinese hamster ovary (CHO)- derived cell lines have become the predominant host for the manufacturing of glycosylated therapeutic proteins. During this period of explosion on the application of CHO expression systems, considerable efforts have been made to improve therapeutic recombinant protein production to meet the consistent quality of biopharmaceutical products.
Genetic stability testing is an important component of CHO production cell bank characterization and is a regulatory requirement. During subsequent CHO cell culture, genomic events such as deletion, rearrangement, and point mutation may occur and result in an altered cell phenotype or gene expression profile. The instability of the CHO production cell line is of great concern because it may negatively affect product integrity, thus posing a risk to the patients. Creative Bioarray offers CHO Cell Line Genetic Stability (MCB, WCB, EOP) Testing to characterize Master Cell Banks (MCB), Working Cell Banks (WCB), and End of Production Cells (EPC) from CHO cell cultures.
According to ICH Q5B and Q5D guidelines, regulating agencies request that cell substrates must be analyzed at two time points (i.e., on the level of the Master Cell Bank and on the level of the End of Production cells) to show their genetic stability. Typical assays include those intended to confirm the integrity of the product transcript, the genome structure at integration site, and the ratio of insert gene copy number.
Genetic Tests | Creative Bioarray Solutions for Genetic Stability Testing | Description |
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Gene Copy Number | qPCR or Locus Amplification & Sequencing | To ensure that the gene of interest is stably maintained and expressed during the whole usable life span of the cell clone, specific qPCR assays for gene copy number determination are designed and validated. |
Integrity of the Transgene | DNA and RNA sequencing | Genetic stability of an insert within e.g. a cell bank has to be demonstrated. By using Sanger sequencing, the sequence/location of the insert can be compared to the reference sequence and possible mutations/deletions can be detected. |
Structural Analysis (transgene insertion sites/restriction analysis) | qPCR or Locus Amplification & Sequencing | To ensure that the gene of interest is stably maintained and expressed during the whole usable life span of the cell clone, specific qPCR assays for gene copy number determination are designed and validated. |
Integrity Pattern of the Transgene | FISH | To ensure that the gene of interest is stably maintained and expressed during the whole usable life span of the cell clone |
Genetic Stability Testing Methods
Creative Bioarray applies the following methods to determine the genetic stability test of recombinant CHO production cell lines:
- Transgene insertion copy number analyzed by qPCR and/or Locus Amplification & Sequencing
- Structural analysis (insertion sites/restriction analysis) by qPCR and/or Locus Amplification & Sequencing
- Transgene integrity pattern analysis by FISH
- DNA and RNA sequencing
The CHO Cell Line Genetic Stability (MCB, WCB, EOP) Testing Features:
- Genetic stability analysis across various generations (e.g., MCB, WCB, EOP)
- In accordance with ICH Q5B and Q5D guidelines
- Final conclusions on stability of analyzed cell bank(s)
- Reporting meeting regulatory requirements
- Pre-finalization report review included
- Fast turnaround time
Quotation and ordering
Our customer service representatives are available 24hr a day! We thank you for considering Creative Bioarray as your CHO Cell Line Genetic Stability (MCB, WCB, EOP) Testing Service partner.
References
- ICH Q5B, Quality of Biotechnological Products: Analysis of the Expression Construct in Cells used for Production of R-DNA Derived Protein Products, Step 4 version (1995).
- Wurm, Florian M., and Maria João Wurm. "Cloning of CHO cells, productivity and genetic stability—a discussion." Processes 5.2 (2017): 20.
- Plavsic, Mark. "Q5D derivation and characterization of cell substrates used for production of biotechnological/biological products." ICH Quality Guidelines (2017): 375-393.
- Galbraith, Daniel. "ICH Q5A: Viral Safety of Biotechnology Products." ICH Quality Guidelines: An Implementation Guide (2017): 311-335.
- Krebs, Lara E., et al. "Effective and efficient characterization of Chinese hamster ovary production cell lines using automated intracellular staining and statistical modeling." Biotechnology Progress 34.3 (2018): 570-583.
- Welch, J. (2017). Tilting at clones: A regulatory perspective on the importance of "Clonality" of mammalian cell banks. CDER/OPQ/OBP/DBRRIV April 24, 2017.
- Paul Wu, et al. "Tools and methods for providing assurance of clonality for legacy cell lines" in "Cell Culture Engineering XVI", A. Robinson, PhD, Tulane University R. Venkat, PhD, MedImmune E. Schaefer, ScD, J&J Janssen Eds, ECI Symposium Series, (2018).
- Frye, Christopher, et al. "Industry view on the relative importance of "clonality" of biopharmaceutical-producing cell lines." Biologicals 44.2 (2016): 117-122.
- Food and Drug Administration, Center for Biologics Evaluation and Research Food and Drug Administration. Supplement to the Points to Consider in the Production and Testing of New Drugs and Biologic& Produced by Recombinant DNA Technology: Nucleic Acid Characterization and Genetic Stability. 1992
- Ph Eur, Monographs: Medicinal and Pharmaceutical Substances, Products of Recombinant DNA Technology. 2016
- ICH Topic Q 5 B, Quality of Biotechnological Products: Analysis of the expression construct in cell lines used for production of rDNA derived protein products. 1996
- Hughes ED, Qu YY, Genik SJ, Lyons RH, Pacheco CD, Lieberman AP, Samuelson LC, Nasonkin IO, Camper SA, Van Keuren ML, et al. Genetic variation in C57BL/6 ES cell lines and genetic instability in the Bruce4 C57BL/6 ES cell line. Mamm Genome 2007; 18(8):549-58; PMID:17828574; https://doi.org/10.1007/s00335-007-9054-0
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